HL_7ZRS_092
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- UCUAAUUAG
- Length
- 9 nucleotides
- Bulged bases
- 7ZRS|1|5|U|2299
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZRS_092 not in the Motif Atlas
- Homologous match to HL_8C3A_050
- Geometric discrepancy: 0.0715
- The information below is about HL_8C3A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
7ZRS|1|5|U|2293
7ZRS|1|5|C|2294
7ZRS|1|5|U|2295
7ZRS|1|5|A|2296
7ZRS|1|5|A|2297
7ZRS|1|5|U|2298
7ZRS|1|5|U|2299
7ZRS|1|5|A|2300
7ZRS|1|5|G|2301
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain BU
- 60S ribosomal protein L23-A
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