HL_7ZS5_051

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCUAAUUAG

Length

9 nucleotides

Bulged bases

7ZS5|1|1|U|2298

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZS5_051 not in the Motif Atlas

Homologous match to HL_8C3A_050

Geometric discrepancy: 0.1191

The information below is about HL_8C3A_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7ZS5|1|1|U|2292
7ZS5|1|1|C|2293
7ZS5|1|1|U|2294
7ZS5|1|1|A|2295
7ZS5|1|1|A|2296
7ZS5|1|1|U|2297
7ZS5|1|1|U|2298
7ZS5|1|1|A|2299
7ZS5|1|1|G|2300

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain BW

60S ribosomal protein L23-A