HL_7ZTA_010

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_010 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0964

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7ZTA|1|16S1|A|320
7ZTA|1|16S1|A|321
7ZTA|1|16S1|C|322
7ZTA|1|16S1|U|323
7ZTA|1|16S1|G|324
7ZTA|1|16S1|A|325
7ZTA|1|16S1|G|326
7ZTA|1|16S1|A|327
7ZTA|1|16S1|C|328
7ZTA|1|16S1|A|329
7ZTA|1|16S1|C|330
7ZTA|1|16S1|G|331
7ZTA|1|16S1|G|332
7ZTA|1|16S1|U|333

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S161

30S ribosomal protein S16

Chain S201

30S ribosomal protein S20