HL_7ZTA_023
3D structure
- PDB id
- 7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAU(2MG)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 7ZTA|1|16S1|A|968, 7ZTA|1|16S1|G|971
- QA status
- Modified nucleotides: 2MG, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZTA_023 not in the Motif Atlas
- Homologous match to HL_5J7L_021
- Geometric discrepancy: 0.1316
- The information below is about HL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7ZTA|1|16S1|G|963
7ZTA|1|16S1|A|964
7ZTA|1|16S1|U|965
7ZTA|1|16S1|2MG|966
7ZTA|1|16S1|5MC|967
7ZTA|1|16S1|A|968
7ZTA|1|16S1|A|969
7ZTA|1|16S1|C|970
7ZTA|1|16S1|G|971
7ZTA|1|16S1|C|972
Current chains
- Chain 16S1
- 16S ribosomal RNA
Nearby chains
- Chain ATR1
- Transfer RNA; tRNA
- Chain PTR1
- Transfer RNA; tRNA
- Chain S091
- 30S ribosomal protein S9
- Chain S101
- 30S ribosomal protein S10
- Chain S131
- 30S ribosomal protein S13
Coloring options: