HL_7ZTA_065

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_065 not in the Motif Atlas

Homologous match to HL_5J7L_164

Geometric discrepancy: 0.1033

The information below is about HL_5J7L_164

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7ZTA|1|23S1|U|1222
7ZTA|1|23S1|G|1223
7ZTA|1|23S1|U|1224
7ZTA|1|23S1|G|1225
7ZTA|1|23S1|A|1226
7ZTA|1|23S1|G|1227

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L201

50S ribosomal protein L20

Chain L211

50S ribosomal protein L21