HL_7ZTA_081

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_081 not in the Motif Atlas

Geometric match to HL_4W90_003

Geometric discrepancy: 0.1516

The information below is about HL_4W90_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7ZTA|1|23S1|C|1868
7ZTA|1|23S1|G|1869
7ZTA|1|23S1|C|1870
7ZTA|1|23S1|A|1871
7ZTA|1|23S1|A|1872
7ZTA|1|23S1|G|1873

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains