HL_7ZTA_082
3D structure
- PDB id
- 7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- G(PSU)AAC(3TD)A(PSU)AAC
- Length
- 11 nucleotides
- Bulged bases
- 7ZTA|1|23S1|A|1913, 7ZTA|1|23S1|C|1914, 7ZTA|1|23S1|A|1916
- QA status
- Modified nucleotides: PSU, 3TD
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZTA_082 not in the Motif Atlas
- Homologous match to HL_5J7L_181
- Geometric discrepancy: 0.0796
- The information below is about HL_5J7L_181
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7ZTA|1|23S1|G|1910
7ZTA|1|23S1|PSU|1911
7ZTA|1|23S1|A|1912
7ZTA|1|23S1|A|1913
7ZTA|1|23S1|C|1914
7ZTA|1|23S1|3TD|1915
7ZTA|1|23S1|A|1916
7ZTA|1|23S1|PSU|1917
7ZTA|1|23S1|A|1918
7ZTA|1|23S1|A|1919
7ZTA|1|23S1|C|1920
Current chains
- Chain 23S1
- 23S ribosomal RNA
Nearby chains
- Chain 16S1
- Small subunit ribosomal RNA; SSU rRNA
- Chain ATR1
- Transfer RNA; tRNA
- Chain MRN1
- mRNA
- Chain PTR1
- Transfer RNA; tRNA
Coloring options: