HL_7ZTA_088

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

7ZTA|1|23S1|A|2268, 7ZTA|1|23S1|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_088 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0694

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7ZTA|1|23S1|C|2264
7ZTA|1|23S1|U|2265
7ZTA|1|23S1|A|2266
7ZTA|1|23S1|A|2267
7ZTA|1|23S1|A|2268
7ZTA|1|23S1|G|2269
7ZTA|1|23S1|A|2270
7ZTA|1|23S1|G|2271
7ZTA|1|23S1|U|2272
7ZTA|1|23S1|A|2273
7ZTA|1|23S1|A|2274
7ZTA|1|23S1|C|2275
7ZTA|1|23S1|G|2276

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L161

50S ribosomal protein L16

Chain L271

50S ribosomal protein L27