HL_7ZTA_093

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

7ZTA|1|23S1|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_093 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0916

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7ZTA|1|23S1|U|2404
7ZTA|1|23S1|G|2405
7ZTA|1|23S1|A|2406
7ZTA|1|23S1|A|2407
7ZTA|1|23S1|U|2408
7ZTA|1|23S1|G|2409
7ZTA|1|23S1|G|2410
7ZTA|1|23S1|A|2411
7ZTA|1|23S1|A|2412
7ZTA|1|23S1|G|2413

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L151

50S ribosomal protein L15