HL_7ZTA_114

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAGCC(G7M)

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_114 not in the Motif Atlas

Homologous match to HL_5J7L_205

Geometric discrepancy: 0.12

The information below is about HL_5J7L_205

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7ZTA|1|16S1|C|522
7ZTA|1|16S1|A|523
7ZTA|1|16S1|G|524
7ZTA|1|16S1|C|525
7ZTA|1|16S1|C|526
7ZTA|1|16S1|G7M|527

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain MRN1

mRNA

Chain S121

30S ribosomal protein S12