HL_7ZTA_115

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGUCCGGCC

Length

9 nucleotides

Bulged bases

7ZTA|1|16S1|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_115 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.2721

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZTA|1|16S1|G|1133
7ZTA|1|16S1|G|1134
7ZTA|1|16S1|U|1135
7ZTA|1|16S1|C|1136
7ZTA|1|16S1|C|1137
7ZTA|1|16S1|G|1138
7ZTA|1|16S1|G|1139
7ZTA|1|16S1|C|1140
7ZTA|1|16S1|C|1141

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S091

30S ribosomal protein S9