HL_7ZTA_117
3D structure
- PDB id
- 7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- A(PSU)UGCA(MIA)A(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZTA_117 not in the Motif Atlas
- Homologous match to HL_5J8B_118
- Geometric discrepancy: 0.1903
- The information below is about HL_5J8B_118
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 54
Unit IDs
7ZTA|1|ATR1|A|28
7ZTA|1|ATR1|PSU|29
7ZTA|1|ATR1|U|30
7ZTA|1|ATR1|G|31
7ZTA|1|ATR1|C|32
7ZTA|1|ATR1|A|33
7ZTA|1|ATR1|MIA|34
7ZTA|1|ATR1|A|35
7ZTA|1|ATR1|PSU|36
Current chains
- Chain ATR1
- tRNA-Cys
Nearby chains
- Chain 16S1
- Small subunit ribosomal RNA; SSU rRNA
- Chain 23S1
- Large subunit ribosomal RNA; LSU rRNA
- Chain MRN1
- mRNA
- Chain S121
- 30S ribosomal protein S12
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