3D structure

PDB id
7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
4.3 Å

Loop

Sequence
GUAAUUC
Length
7 nucleotides
Bulged bases
7ZUW|1|2|U|158, 7ZUW|1|2|U|159
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZUW_003 not in the Motif Atlas
Homologous match to HL_4V88_188
Geometric discrepancy: 0.2528
The information below is about HL_4V88_188
Detailed Annotation
GNRA related
Broad Annotation
GNRA related
Motif group
HL_37824.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
360

Unit IDs

7ZUW|1|2|G|154
7ZUW|1|2|U|155
7ZUW|1|2|A|156
7ZUW|1|2|A|157
7ZUW|1|2|U|158
7ZUW|1|2|U|159
7ZUW|1|2|C|160

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain AG
40S ribosomal protein S6-A
Chain AY
40S ribosomal protein S24-A

Coloring options:


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