HL_7ZUW_012

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UAAUUCA

Length

7 nucleotides

Bulged bases

7ZUW|1|2|A|452, 7ZUW|1|2|U|454, 7ZUW|1|2|C|455

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUW_012 not in the Motif Atlas

Homologous match to HL_4V88_197

Geometric discrepancy: 0.3432

The information below is about HL_4V88_197

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7ZUW|1|2|U|450
7ZUW|1|2|A|451
7ZUW|1|2|A|452
7ZUW|1|2|U|453
7ZUW|1|2|U|454
7ZUW|1|2|C|455
7ZUW|1|2|A|456

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AE

40S ribosomal protein S4-A

Chain AY

40S ribosomal protein S24-A