HL_7ZUW_046

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CUUCG

Length

5 nucleotides

Bulged bases

7ZUW|1|5|U|133, 7ZUW|1|5|C|135

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUW_046 not in the Motif Atlas

Homologous match to HL_8C3A_004

Geometric discrepancy: 0.242

The information below is about HL_8C3A_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86929.1

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

7ZUW|1|5|C|132
7ZUW|1|5|U|133
7ZUW|1|5|U|134
7ZUW|1|5|C|135
7ZUW|1|5|G|136

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BM

Ribosomal protein L15

Chain Bg

60S ribosomal protein L35-A