HL_7ZUW_061

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

7ZUW|1|5|A|847

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUW_061 not in the Motif Atlas

Homologous match to HL_8C3A_019

Geometric discrepancy: 0.5052

The information below is about HL_8C3A_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7ZUW|1|5|G|845
7ZUW|1|5|G|846
7ZUW|1|5|A|847
7ZUW|1|5|A|848
7ZUW|1|5|A|849
7ZUW|1|5|C|850

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain AL

40S ribosomal protein S11-A

Chain AN

40S ribosomal protein S13