HL_7ZUW_085

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7ZUW|1|5|U|1926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUW_085 not in the Motif Atlas

Geometric match to HL_7RQB_042

Geometric discrepancy: 0.1219

The information below is about HL_7RQB_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03562.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

56

Unit IDs

7ZUW|1|5|C|1924
7ZUW|1|5|U|1925
7ZUW|1|5|U|1926
7ZUW|1|5|C|1927
7ZUW|1|5|G|1928
7ZUW|1|5|G|1929

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain Bm

60S ribosomal protein L41

Chain Bo

60S ribosomal protein L43-A