3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GAUAGUGGC
Length
9 nucleotides
Bulged bases
7ZUX|1|2|G|337
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZUX_008 not in the Motif Atlas
Homologous match to HL_4V88_193
Geometric discrepancy: 0.1101
The information below is about HL_4V88_193
Detailed Annotation
GNRA related
Broad Annotation
GNRA related
Motif group
HL_82182.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
19

Unit IDs

7ZUX|1|2|G|330
7ZUX|1|2|A|331
7ZUX|1|2|U|332
7ZUX|1|2|A|333
7ZUX|1|2|G|334
7ZUX|1|2|U|335
7ZUX|1|2|G|336
7ZUX|1|2|G|337
7ZUX|1|2|C|338

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain DI
40S ribosomal protein S8-B
Chain DL
40S ribosomal protein S11-A

Coloring options:


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