HL_7ZUX_069

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

7ZUX|1|5|U|1242, 7ZUX|1|5|G|1243, 7ZUX|1|5|A|1246

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_069 not in the Motif Atlas

Homologous match to HL_5TBW_027

Geometric discrepancy: 0.4536

The information below is about HL_5TBW_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7ZUX|1|5|C|1240
7ZUX|1|5|A|1241
7ZUX|1|5|U|1242
7ZUX|1|5|G|1243
7ZUX|1|5|G|1244
7ZUX|1|5|A|1245
7ZUX|1|5|A|1246
7ZUX|1|5|G|1247
7ZUX|1|5|U|1248
7ZUX|1|5|C|1249
7ZUX|1|5|G|1250

Current chains

Chain 5

25S ribosomal RNA

Nearby chains