HL_7ZUX_076

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AUUUUAU

Length

7 nucleotides

Bulged bases

7ZUX|1|5|U|1569

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_076 not in the Motif Atlas

Geometric match to HL_4V88_190

Geometric discrepancy: 0.3829

The information below is about HL_4V88_190

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91015.1

Basepair signature

cWW-cWH-F

Number of instances in this motif group

4

Unit IDs

7ZUX|1|5|A|1567
7ZUX|1|5|U|1568
7ZUX|1|5|U|1569
7ZUX|1|5|U|1570
7ZUX|1|5|U|1571
7ZUX|1|5|A|1572
7ZUX|1|5|U|1573

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 3

5.8S ribosomal RNA; 5.8S rRNA

Chain EW

60S ribosomal protein L25