3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
UCUAAUUAG
Length
9 nucleotides
Bulged bases
7ZUX|1|5|U|2299
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZUX_092 not in the Motif Atlas
Homologous match to HL_8C3A_050
Geometric discrepancy: 0.0827
The information below is about HL_8C3A_050
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_27115.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
22

Unit IDs

7ZUX|1|5|U|2293
7ZUX|1|5|C|2294
7ZUX|1|5|U|2295
7ZUX|1|5|A|2296
7ZUX|1|5|A|2297
7ZUX|1|5|U|2298
7ZUX|1|5|U|2299
7ZUX|1|5|A|2300
7ZUX|1|5|G|2301

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain 2
Small subunit ribosomal RNA; SSU rRNA
Chain EU
60S ribosomal protein L23-A

Coloring options:


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