HL_7ZW0_056

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

7ZW0|1|LA|U|879, 7ZW0|1|LA|A|883

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_056 not in the Motif Atlas

Homologous match to HL_8C3A_020

Geometric discrepancy: 0.0783

The information below is about HL_8C3A_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39334.8

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

7ZW0|1|LA|A|876
7ZW0|1|LA|C|877
7ZW0|1|LA|G|878
7ZW0|1|LA|U|879
7ZW0|1|LA|G|880
7ZW0|1|LA|C|881
7ZW0|1|LA|A|882
7ZW0|1|LA|A|883
7ZW0|1|LA|A|884
7ZW0|1|LA|U|885

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LF

60S ribosomal protein L3

Chain LS

60S ribosomal protein L17-A

Chain Lm

60S ribosomal protein L37-A