HL_7ZW0_060

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

7ZW0|1|LA|U|1081

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_060 not in the Motif Atlas

Geometric match to HL_5TBW_024

Geometric discrepancy: 0.1223

The information below is about HL_5TBW_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7ZW0|1|LA|C|1076
7ZW0|1|LA|U|1077
7ZW0|1|LA|U|1078
7ZW0|1|LA|A|1079
7ZW0|1|LA|A|1080
7ZW0|1|LA|U|1081
7ZW0|1|LA|U|1082
7ZW0|1|LA|G|1083

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LH

60S ribosomal protein L5

Chain LW

60S ribosomal protein L21-A

Chain Le

60S ribosomal protein L29