HL_7ZW0_082

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UCUAAUUAAAA

Length

11 nucleotides

Bulged bases

7ZW0|1|LA|A|2138, 7ZW0|1|LA|A|2139, 7ZW0|1|LA|U|2140, 7ZW0|1|LA|A|2144

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_082 not in the Motif Atlas

Homologous match to HL_8C3A_046

Geometric discrepancy: 0.0611

The information below is about HL_8C3A_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43613.6

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

7ZW0|1|LA|U|2135
7ZW0|1|LA|C|2136
7ZW0|1|LA|U|2137
7ZW0|1|LA|A|2138
7ZW0|1|LA|A|2139
7ZW0|1|LA|U|2140
7ZW0|1|LA|U|2141
7ZW0|1|LA|A|2142
7ZW0|1|LA|A|2143
7ZW0|1|LA|A|2144
7ZW0|1|LA|A|2145

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LE

60S ribosomal protein L2-A

Chain Lm

60S ribosomal protein L37-A