HL_7ZW0_091

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUAAACGAUAACG

Length

13 nucleotides

Bulged bases

7ZW0|1|LA|A|2637, 7ZW0|1|LA|C|2644

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_091 not in the Motif Atlas

Homologous match to HL_8C3A_056

Geometric discrepancy: 0.0888

The information below is about HL_8C3A_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.9

Basepair signature

cWW-tHH-cWW-tHS-F-F-tWW

Number of instances in this motif group

8

Unit IDs

7ZW0|1|LA|U|2633
7ZW0|1|LA|U|2634
7ZW0|1|LA|A|2635
7ZW0|1|LA|A|2636
7ZW0|1|LA|A|2637
7ZW0|1|LA|C|2638
7ZW0|1|LA|G|2639
7ZW0|1|LA|A|2640
7ZW0|1|LA|U|2641
7ZW0|1|LA|A|2642
7ZW0|1|LA|A|2643
7ZW0|1|LA|C|2644
7ZW0|1|LA|G|2645

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LM

60S ribosomal protein L10

Chain LW

60S ribosomal protein L21-A

Chain Le

60S ribosomal protein L29