HL_7ZW0_098

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGCAGAAU

Length

8 nucleotides

Bulged bases

7ZW0|1|LA|G|2898

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZW0_098 not in the Motif Atlas

Homologous match to HL_8C3A_063

Geometric discrepancy: 0.1041

The information below is about HL_8C3A_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79150.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7ZW0|1|LA|A|2897
7ZW0|1|LA|G|2898
7ZW0|1|LA|C|2899
7ZW0|1|LA|A|2900
7ZW0|1|LA|G|2901
7ZW0|1|LA|A|2902
7ZW0|1|LA|A|2903
7ZW0|1|LA|U|2904

Current chains

Chain LA

25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LL

60S ribosomal protein L9-A

Chain Lp

60S ribosomal protein L40-A