HL_8A57_030
3D structure
- PDB id
- 8A57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8A57_030 not in the Motif Atlas
- Geometric match to HL_6PRV_002
- Geometric discrepancy: 0.1275
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.3
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
8A57|1|A|C|1138
8A57|1|A|G|1139
8A57|1|A|U|1140
8A57|1|A|A|1141
8A57|1|A|A|1142
8A57|1|A|U|1143
8A57|1|A|A|1144
8A57|1|A|G|1145
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain D
- GTPase HflX
- Chain E
- 50S ribosomal protein L11
- Chain K
- 50S ribosomal protein L6
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