HL_8B0X_051

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8B0X_051 not in the Motif Atlas

Homologous match to HL_5J7L_153

Geometric discrepancy: 0.1157

The information below is about HL_5J7L_153

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13529.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8B0X|1|a|U|643
8B0X|1|a|U|644
8B0X|1|a|A|645
8B0X|1|a|A|646
8B0X|1|a|C|647
8B0X|1|a|U|648
8B0X|1|a|G|649

Current chains

Chain a

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L33

Chain 2

50S ribosomal protein L35