HL_8B2L_044

3D structure

PDB id

8B2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the plant 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8B2L_044 not in the Motif Atlas

Homologous match to HL_8C3A_044

Geometric discrepancy: 0.5659

The information below is about HL_8C3A_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28980.2

Basepair signature

cWW-F

Number of instances in this motif group

11

Unit IDs

8B2L|1|A3|G|1958
8B2L|1|A3|G|1959
8B2L|1|A3|G|2095
8B2L|1|A3|A|2096
8B2L|1|A3|A|2097
8B2L|1|A3|C|2098

Current chains

Chain A3

25S rRNA

Nearby chains

Chain H3

Ribosomal protein L19