HL_8BGH_039
3D structure
- PDB id
- 8BGH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- AGAGAAU
- Length
- 7 nucleotides
- Bulged bases
- 8BGH|1|0|A|1634
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BGH_039 not in the Motif Atlas
- Homologous match to HL_5J7L_174
- Geometric discrepancy: 0.142
- The information below is about HL_5J7L_174
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
8BGH|1|0|A|1630
8BGH|1|0|G|1631
8BGH|1|0|A|1632
8BGH|1|0|G|1633
8BGH|1|0|A|1634
8BGH|1|0|A|1635
8BGH|1|0|U|1636
Current chains
- Chain 0
- 23S rRNA RRLG-RRNA
Nearby chains
No other chains within 10ÅColoring options: