HL_8BH4_084
3D structure
- PDB id
- 8BH4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BH4_084 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.128
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8BH4|1|2|C|689
8BH4|1|2|G|690
8BH4|1|2|G|691
8BH4|1|2|U|692
8BH4|1|2|G|693
8BH4|1|2|A|694
8BH4|1|2|A|695
8BH4|1|2|A|696
8BH4|1|2|U|697
8BH4|1|2|G|698
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3
- mRNA
- Chain k
- 30S ribosomal protein S7
- Chain o
- 30S ribosomal protein S11
- Chain y
- 30S ribosomal protein S21
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