HL_8BH4_091
3D structure
- PDB id
- 8BH4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- UUCAGAGAUG
- Length
- 10 nucleotides
- Bulged bases
- 8BH4|1|2|A|1012
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BH4_091 not in the Motif Atlas
- Geometric match to HL_2Y9H_005
- Geometric discrepancy: 0.3116
- The information below is about HL_2Y9H_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86870.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8BH4|1|2|U|1009
8BH4|1|2|U|1010
8BH4|1|2|C|1011
8BH4|1|2|A|1012
8BH4|1|2|G|1013
8BH4|1|2|A|1014
8BH4|1|2|G|1015
8BH4|1|2|A|1016
8BH4|1|2|U|1017
8BH4|1|2|G|1018
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain r
- 30S ribosomal protein S14
- Chain w
- 30S ribosomal protein S19
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