HL_8BH6_017

3D structure

PDB id

8BH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 30S ribosomal subunit from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BH6_017 not in the Motif Atlas

Homologous match to HL_4LFB_017

Geometric discrepancy: 0.2217

The information below is about HL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

8BH6|1|a|G|794
8BH6|1|a|A|795
8BH6|1|a|U|796
8BH6|1|a|U|797
8BH6|1|a|A|798
8BH6|1|a|G|799
8BH6|1|a|A|800
8BH6|1|a|U|801
8BH6|1|a|A|802
8BH6|1|a|C|803
8BH6|1|a|C|804

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11