HL_8BHF_084

3D structure

PDB id

8BHF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHF|1|A3|G|377
8BHF|1|A3|U|378
8BHF|1|A3|C|379
8BHF|1|A3|G|380
8BHF|1|A3|C|381
8BHF|1|A3|C|382
8BHF|1|A3|G|383
8BHF|1|A3|U|384
8BHF|1|A3|G|385
8BHF|1|A3|C|386
8BHF|1|A3|C|387

Current chains

Chain A3

18S ribosomal RNA

Nearby chains

Chain J3

40S ribosomal protein S8

Chain M3

40S ribosomal protein S11