HL_8BHL_090

3D structure

PDB id

8BHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GAUGCAACGC

Length

10 nucleotides

Bulged bases

8BHL|1|2|G|971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHL_090 not in the Motif Atlas

Homologous match to HL_4LFB_021

Geometric discrepancy: 0.1084

The information below is about HL_4LFB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97521.1

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

8BHL|1|2|G|963
8BHL|1|2|A|964
8BHL|1|2|U|965
8BHL|1|2|G|966
8BHL|1|2|C|967
8BHL|1|2|A|968
8BHL|1|2|A|969
8BHL|1|2|C|970
8BHL|1|2|G|971
8BHL|1|2|C|972

Current chains

Chain 2

16S rRNA RRSB-RRNA

Nearby chains

Chain 4

Transfer RNA; tRNA

Chain m

30S ribosomal protein S9

Chain n

30S ribosomal protein S10