HL_8BHN_012

3D structure

PDB id

8BHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

8BHN|1|0|G|386, 8BHN|1|0|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHN_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1676

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8BHN|1|0|A|382
8BHN|1|0|C|383
8BHN|1|0|A|384
8BHN|1|0|C|385
8BHN|1|0|G|386
8BHN|1|0|U|387
8BHN|1|0|G|388
8BHN|1|0|G|389
8BHN|1|0|U|390
8BHN|1|0|A|391
8BHN|1|0|U|392

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain U

50S ribosomal protein L28