HL_8BIP_062
3D structure
- PDB id
- 8BIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUUCAUAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BIP_062 not in the Motif Atlas
- Homologous match to HL_8C3A_062
- Geometric discrepancy: 0.16
- The information below is about HL_8C3A_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82661.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8BIP|1|1|C|2840
8BIP|1|1|G|2841
8BIP|1|1|U|2842
8BIP|1|1|U|2843
8BIP|1|1|C|2844
8BIP|1|1|A|2845
8BIP|1|1|U|2846
8BIP|1|1|A|2847
8BIP|1|1|G|2848
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain LH
- 60S ribosomal protein L9-A
- Chain LI
- 60S ribosomal protein L10
- Chain Lm
- 60S ribosomal protein L40-A
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