HL_8BJQ_049

3D structure

PDB id

8BJQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

8BJQ|1|1|A|2256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BJQ_049 not in the Motif Atlas

Homologous match to HL_8C3A_049

Geometric discrepancy: 0.1527

The information below is about HL_8C3A_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

8BJQ|1|1|G|2253
8BJQ|1|1|U|2254
8BJQ|1|1|A|2255
8BJQ|1|1|A|2256
8BJQ|1|1|C|2257
8BJQ|1|1|U|2258
8BJQ|1|1|A|2259
8BJQ|1|1|U|2260
8BJQ|1|1|G|2261
8BJQ|1|1|A|2262
8BJQ|1|1|C|2263

Current chains

Chain 1

25S rRNA

Nearby chains