HL_8BN3_096
3D structure
- PDB id
- 8BN3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S, ES7s delta, eIF5A, Stm1 containing
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 8BN3|1|2|A|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BN3_096 not in the Motif Atlas
- Homologous match to HL_4V88_212
- Geometric discrepancy: 0.0936
- The information below is about HL_4V88_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8BN3|1|2|G|1175
8BN3|1|2|A|1176
8BN3|1|2|C|1177
8BN3|1|2|U|1178
8BN3|1|2|C|1179
8BN3|1|2|A|1180
8BN3|1|2|A|1181
8BN3|1|2|C|1182
8BN3|1|2|A|1183
8BN3|1|2|C|1184
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C6
- 40S ribosomal protein S16-A
- Chain D0
- RPS20 isoform 1
- Chain D9
- RPS29A isoform 1
- Chain SM
- STM1 isoform 1
Coloring options: