HL_8BN3_099

3D structure

PDB id

8BN3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S, ES7s delta, eIF5A, Stm1 containing

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

8BN3|1|2|U|1301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BN3_099 not in the Motif Atlas

Homologous match to HL_4V88_215

Geometric discrepancy: 0.0985

The information below is about HL_4V88_215

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8BN3|1|2|C|1296
8BN3|1|2|U|1297
8BN3|1|2|U|1298
8BN3|1|2|A|1299
8BN3|1|2|A|1300
8BN3|1|2|U|1301
8BN3|1|2|U|1302
8BN3|1|2|G|1303

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C7

ES17