HL_8BYV_017
3D structure
- PDB id
- 8BYV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BYV_017 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.1259
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8BYV|1|a|G|794
8BYV|1|a|A|795
8BYV|1|a|U|796
8BYV|1|a|U|797
8BYV|1|a|A|798
8BYV|1|a|G|799
8BYV|1|a|A|800
8BYV|1|a|U|801
8BYV|1|a|A|802
8BYV|1|a|C|803
8BYV|1|a|C|804
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Ribosome-binding factor A
- Chain k
- 30S ribosomal protein S11
Coloring options: