HL_8C01_026

3D structure

PDB id

8C01 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Enp1TAP_A population of yeast small ribosomal subunit precursors

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

8C01|1|2|U|1314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C01_026 not in the Motif Atlas

Homologous match to HL_4V88_215

Geometric discrepancy: 0.3408

The information below is about HL_4V88_215

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8C01|1|2|C|1309
8C01|1|2|U|1310
8C01|1|2|U|1311
8C01|1|2|A|1312
8C01|1|2|A|1313
8C01|1|2|U|1314
8C01|1|2|U|1315
8C01|1|2|G|1316

Current chains

Chain 2

18S rRNA precursor

Nearby chains