HL_8C3A_095

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUGUUC

Length

6 nucleotides

Bulged bases

8C3A|1|AS|G|761

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C3A_095 not in the Motif Atlas

Homologous match to HL_8C3A_018

Geometric discrepancy: 0.0565

The information below is about HL_8C3A_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

8C3A|1|AS|G|759
8C3A|1|AS|U|760
8C3A|1|AS|G|761
8C3A|1|AS|U|762
8C3A|1|AS|U|763
8C3A|1|AS|C|764

Current chains

Chain AS

25S

Nearby chains

Chain BG

60S ribosomal protein L13