HL_8C3A_121
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGGCACGUUUAAC
- Length
- 13 nucleotides
- Bulged bases
- 8C3A|1|AS|G|2066
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8C3A_121 not in the Motif Atlas
- Homologous match to HL_8C3A_044
- Geometric discrepancy: 0.1281
- The information below is about HL_8C3A_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28980.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 11
Unit IDs
8C3A|1|AS|G|1948
8C3A|1|AS|G|1949
8C3A|1|AS|G|2062
8C3A|1|AS|C|2063
8C3A|1|AS|A|2064
8C3A|1|AS|C|2065
8C3A|1|AS|G|2066
8C3A|1|AS|U|2067
8C3A|1|AS|U|2068
8C3A|1|AS|U|2069
8C3A|1|AS|A|2070
8C3A|1|AS|A|2071
8C3A|1|AS|C|2072
Current chains
- Chain AS
- 25S
Nearby chains
- Chain BM
- 60S ribosomal protein L19-A
- Chain CY
- 40S ribosomal protein S11A
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