HL_8C91_044

3D structure

PDB id

8C91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.19 Å

Loop

Sequence

CACGAAAGUG

Length

10 nucleotides

Bulged bases

8C91|1|A|A|1808

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C91_044 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.2066

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8C91|1|A|C|1804
8C91|1|A|A|1805
8C91|1|A|C|1806
8C91|1|A|G|1807
8C91|1|A|A|1808
8C91|1|A|A|1809
8C91|1|A|A|1810
8C91|1|A|G|1811
8C91|1|A|U|1812
8C91|1|A|G|1813

Current chains

Chain A

23S rRNA

Nearby chains