HL_8C97_032

3D structure

PDB id

8C97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.07 Å

Loop

Sequence

GAUAAAC

Length

7 nucleotides

Bulged bases

8C97|1|A|A|2766

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C97_032 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2571

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8C97|1|A|G|2737
8C97|1|A|A|2738
8C97|1|A|U|2739
8C97|1|A|A|2764
8C97|1|A|A|2765
8C97|1|A|A|2766
8C97|1|A|C|2767

Current chains

Chain A

23S rRNA

Nearby chains