HL_8C99_012

3D structure

PDB id

8C99 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time limited cryo-EM reveals early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

8C99|1|A|G|386

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C99_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.4509

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8C99|1|A|A|382
8C99|1|A|C|383
8C99|1|A|A|384
8C99|1|A|C|385
8C99|1|A|G|386
8C99|1|A|U|387
8C99|1|A|G|388
8C99|1|A|G|389
8C99|1|A|U|390
8C99|1|A|A|391
8C99|1|A|U|392

Current chains

Chain A

23S rRNA

Nearby chains