HL_8CRE_182
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUUGAGAGCU
- Length
- 10 nucleotides
- Bulged bases
- 8CRE|1|B|G|1228, 8CRE|1|B|G|1230
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8CRE_182 not in the Motif Atlas
- Homologous match to HL_8C3A_218
- Geometric discrepancy: 0.0769
- The information below is about HL_8C3A_218
- Detailed Annotation
- Anticodon loop related
- Broad Annotation
- Anticodon loop related
- Motif group
- HL_81538.1
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
8CRE|1|B|A|1223
8CRE|1|B|U|1224
8CRE|1|B|U|1225
8CRE|1|B|G|1226
8CRE|1|B|A|1227
8CRE|1|B|G|1228
8CRE|1|B|A|1229
8CRE|1|B|G|1230
8CRE|1|B|C|1231
8CRE|1|B|U|1232
Current chains
- Chain B
- 18S
Nearby chains
- Chain R
- 40S ribosomal protein S15
- Chain f
- 40S ribosomal protein S29A
- Chain h
- Ubiquitin-40S ribosomal protein S31 fusion protein
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