HL_8CRX_009

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

8CRX|1|A|A|346

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CRX_009 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1186

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

8CRX|1|A|C|344
8CRX|1|A|U|345
8CRX|1|A|A|346
8CRX|1|A|C|347
8CRX|1|A|G|348
8CRX|1|A|G|349

Current chains

Chain A

RNA (1537-MER)

Nearby chains

Chain j

50S ribosomal protein L14

Chain o

50S ribosomal protein L19