HL_8CRX_078

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUUUGG

Length

6 nucleotides

Bulged bases

8CRX|1|a|U|1877

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CRX_078 not in the Motif Atlas

Homologous match to HL_7RQB_042

Geometric discrepancy: 0.0731

The information below is about HL_7RQB_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03562.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

56

Unit IDs

8CRX|1|a|C|1875
8CRX|1|a|U|1876
8CRX|1|a|U|1877
8CRX|1|a|U|1878
8CRX|1|a|G|1879
8CRX|1|a|G|1880

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain X

30S ribosomal protein bS22

Chain c

50S ribosomal protein L2